c.5668G>T (p.Gly1890X)
Variant ID | Exon | OMIM ID |
2 | Exon 41 | 610142.0001 |
Domains | RNA effect | Control frequency | Controls origin |
KID II, CC XII | RNA stability | 0/150 - 0/>95 | Italy and Asia - not mentioned |
The reading frame is interrupted by a premature STOP codon.
The mRNA produced might be targeted for nonsense mediated decay (NMD).
Patient information | Allele 1 | Allele 2 | |||||||||||||||
Patient ID | Family ID | Gender | Age | Origin | Disease | Segregation | Parental consanguinity | Consanguinity degree | Exon/intron | Nucleotide nomencl. | Protein nomencl. | Detection method | Exon/intron | Nucleotide nomencl. | Protein nomencl. | Detection method | Reference |
COR51 II:1 | COR51 | male | 17 y | Turkey | CORS | yes | yes | Exon 41 | 5668G>T | G1890X | Direct sequencing (Sanger) | Exon 41 | 5668G>T | G1890X | Direct sequencing (Sanger) | Valente (2006) | |
COR51 II:2 | COR51 | male | 15 y | Turkey | CORS | yes | yes | Exon 41 | 5668G>T | G1890X | Direct sequencing (Sanger) | Exon 41 | 5668G>T | G1890X | Direct sequencing (Sanger) | Valente (2006) | |
F63 II-1 | F63 | Germany | CORS | yes | no | Exon 41 | G5668T | G1890X | Direct sequencing (Sanger) | Exon 36 | 4656delA | K1552fsX1556 | Direct sequencing (Sanger) | Sayer (2006) | |||
F700 III-4 | F700 | Turkey | CORS | yes | yes | Exon 42 | G5668T | G1890X | Direct sequencing (Sanger) | Exon 42 | G5668T | G1890X | Direct sequencing (Sanger) | Sayer (2006) | |||
F700 III-6 | F700 | Turkey | CORS | yes | yes | Exon 42 | G5668T | G1890X | Direct sequencing (Sanger) | Exon 42 | G5668T | G1890X | Direct sequencing (Sanger) | Sayer (2006) | |||
F944 III-1 | F944 | Turkey | JS + kidney | yes | yes | Exon 42 | G5668T | G1890X | Direct sequencing (Sanger) | Exon 42 | G5668T | G1890X | Direct sequencing (Sanger) | Sayer (2006) | |||
F944 III-2 | F944 | Turkey | JS + kidney | yes | yes | Exon 42 | G5668T | G1890X | Direct sequencing (Sanger) | Exon 42 | G5668T | G1890X | Direct sequencing (Sanger) | Sayer (2006) | |||
COR003 | female | 6 y | Italy | CORS | unknown | no | Exon 41 | 5668G>T | G1890X | DHPLC | Brancati (2007) | ||||||
MTI154 | female | 6 y | India | CORS | unknown | no | Exon 41 | 5668G>T | G1890X | DHPLC | Exon 41 | 5668G>T | G1890X | DHPLC | Brancati (2007) | ||
COR125 | female | 10 y | United Kingdom | CORS | unknown | no | Exon 41 | 5668G>T | G1890X | DHPLC | Exon 40 | 5431_5433delGA | N1810fsX1816 | DHPLC | Brancati (2007) | ||
MTI118 | female | 12 y | Ireland | CORS | unknown | no | Exon 41 | 5668G>T | G1890X | DHPLC | Exon 28 | 3167_3175insA | I1055fsX1069 | DHPLC | Brancati (2007) | ||
MTI012 | male | 8 y | United Arab Emirates | JS | unknown | yes | Exon 41 | 5668G>T | G1890X | DHPLC | Exon 41 | 5668G>T | G1890X | DHPLC | Brancati (2007) | ||
MTI587 | male | 5 y | United Arab Emirates | JS + kidney | unknown | yes | Exon 41 | 5668G>T | G1890X | DHPLC | Exon 41 | 5668G>T | G1890X | DHPLC | Brancati (2007) | ||
P4 | sibs | male | 17 y | LCA | unknown | unknown | Exon 41 | c.5668G>T | p.G1890X | Intron 26 | c.2991+1655A>G | Splice defect | Cideciyan (2007) | ||||
P5 | sibs | female | 19 y | LCA | unknown | unknown | Exon 41 | c.5668G>T | p.G1890X | Intron 26 | c.2991+1655A>G | Splice defect | Cideciyan (2007) |